Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAAGCACGCTCGCGGGGGCTTGCGACCGCCTTCCTGGGAAGCTGTC
..(((((((((((((((((.(&.).)))))))))))..........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047420537
GeneSymbolPPIA
Binding site49,99
Score0.846
Seed1
Au0.338
Energy-24.5
Binding len31
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings17
Pairings in 3prime end7
Position5UTR
2D Structure