Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGGAGGGAAGCCCAAGCTCTTTTTCATCCAGGCCTGTGGTGG
(((((((((((((((((((...&)))))))))))).))).........................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_032996
GeneSymbolCASP9
Binding site896,942
Score1.0
Seed1
Au0.441
Energy-23.3
Binding len46
Me-3.938
Phylopstem-0.10603807111111109
Phylopflank0.11510263125
Longest consecutive pairings12
Position of longest consecutive pairings34
Pairings in 3prime end5
PositionCDS
2D Structure