Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGGAGGTG
(((((((((((((.((((((..&))))))...)))))))))......................)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033017
GeneSymbolTRIM4
Binding site1767,1812
Score0.923
Seed1
Au0.441
Energy-17.8
Binding len45
Me-4.794
Phylopstem0.6444121857142857
Phylopflank0.36201960375000003
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end6
Position3UTR
2D Structure