Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGAAGACACAGCTCATCCCAAACTCGTCTTCTCCCAGGAAGGGAGATACGTGAAAAATACAGCATCAGCCAGTT
.(((((((((((((((((.(((&.)))))))))))))........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033017
GeneSymbolTRIM4
Binding site1063,1138
Score0.846
Seed1
Au0.544
Energy-27.6
Binding len46
Me-3.793
Phylopstem-0.14520699512195123
Phylopflank-0.03551501750000001
Longest consecutive pairings13
Position of longest consecutive pairings32
Pairings in 3prime end7
PositionCDS
2D Structure