Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCAGGAACTGACCAGCTCAGCGAGGAGCCATAATGTGC
((((((((((((.((((((...&.)))))).)))))))))....))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033018
GeneSymbolCDK16
Binding site2775,2816
Score0.923
Seed1
Au0.412
Energy-26.1
Binding len25
Me-5.227
Phylopstem1.1411583937499998
Phylopflank0.9639781862499998
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure