Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGAATGCTGCCAGA
..(((((..(.((((((((...&)))))))).)..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033020
GeneSymbolTRIM33
Binding site1903,1921
Score1.0
Seed0
Au0.412
Energy-20.6
Binding len18
Me-11.152
Phylopstem-0.065388475
Phylopflank0.14296391374999998
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure