Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&CGTACAGTACCAAAGGTAGAAGTT
.(((.(((((((((((((...&.))))))))))))).))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_033026
GeneSymbolPCLO
Binding site8482,8506
Score0.923
Seed0
Au0.691
Energy-17.2
Binding len19
Me-7.912
Phylopstem6.524390153846154
Phylopflank3.842193165000002
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure