Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TATCCAGAAACACGACAAGTCATTTCAGGAGCTGGG
..((((((((((((((((((..&))))))))).................))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033026
GeneSymbolPCLO
Binding site9427,9463
Score0.846
Seed1
Au0.529
Energy-23.5
Binding len36
Me-4.957
Phylopstem3.821420318857143
Phylopflank2.5657415315000005
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end6
PositionCDS
2D Structure