Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCAGAGGGTGAAGAAGGATGAGAAGGAGCA
.....(((((((((((((((..&)))))))).................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033045
GeneSymbolKRT84
Binding site537,570
Score0.885
Seed0
Au0.5
Energy-22.0
Binding len33
Me-13.666
Phylopstem1.633902128125
Phylopflank1.5934812525
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end6
PositionCDS
2D Structure