Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCAACACTTGTGTGCCCTGGA
.((.((((((((((((.(((((&))))).))).)))))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033071
GeneSymbolSYNE1
Binding site22249,22273
Score0.923
Seed0
Au0.515
Energy-20.8
Binding len24
Me-6.825
Phylopstem1.8790313153846154
Phylopflank2.5223080737499997
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure