Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGGGGCAGAAAGTT
.(((..(((((((((((((...&))))))))))).))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033092
GeneSymbolTRIM5
Binding site524,544
Score0.846
Seed0
Au0.471
Energy-23.7
Binding len20
Me-9.813
Phylopstem0.16151592857142857
Phylopflank0.051773675
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure