Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGTCCCTGAGAGAGCTCATCTCAGATCTGGAGCATCGGCTGCAGGGGTCAGTGA
(((((((((((((((((((.((&.))..))))))))..........))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033092
GeneSymbolTRIM5
Binding site940,998
Score0.846
Seed1
Au0.412
Energy-22.5
Binding len35
Me-3.938
Phylopstem-0.696198320689655
Phylopflank-0.12392779999999996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure