Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCCATGCTAGACAAAGGAGAGAGTAGCTGCCCTGTGTGCCGGA
..((((((((((..((((....&.))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033093
GeneSymbolTRIM5
Binding site252,298
Score0.897
Seed1
Au0.456
Energy-21.4
Binding len18
Me-7.103
Phylopstem-0.19856743
Phylopflank-0.03013227375000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure