Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACTACGTTGCCAGGA
.(((((((.((...(((((...&)))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033100
GeneSymbolCDHR1
Binding site1647,1665
Score0.846
Seed1
Au0.397
Energy-19.3
Binding len18
Me-10.342
Phylopstem4.7532697142857145
Phylopflank4.236315115
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure