Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACGACCACATGCCAGA
..(((((((....((((((...&)))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033103
GeneSymbolRHPN2
Binding site1189,1208
Score0.846
Seed1
Au0.397
Energy-16.6
Binding len19
Me-13.66
Phylopstem-0.019117085714285702
Phylopflank0.5798254749999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure