Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033103
GeneSymbolRHPN2
Binding site2953,2986
Score0.846
Seed1
Au0.412
Energy-28.9
Binding len24
Me-10.109
Phylopstem2.7562290909090907
Phylopflank3.6683441649999997
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure