Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCAGTTCAGGTACTTGGCATTGCTAAGCTCAGAACAGGACTTGCCAGTGT
(((((((((((((((((((...&.)))))))).))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033105
GeneSymbolDNAJC5B
Binding site73,125
Score1.0
Seed1
Au0.559
Energy-27.0
Binding len25
Me-3.938
Phylopstem0.7147482260869567
Phylopflank0.657415215
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end5
Position5UTR
2D Structure