Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGCCCGGGAGGAGGCGGCGG
(.(((.((((.(((((((((((&)))).))))))))))).))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033116
GeneSymbolNEK9
Binding site2371,2394
Score0.846
Seed0
Au0.353
Energy-26.1
Binding len23
Me-9.827
Phylopstem0.6858481666666667
Phylopflank0.32809604750000004
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure