Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTGTATTCAAGGCCAGGTT
((((((((((((((........&))))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033127
GeneSymbolSEC16B
Binding site520,540
Score0.846
Seed1
Au0.603
Energy-16.6
Binding len20
Me-4.906
Phylopstem0.9779398421052631
Phylopflank0.8704400695125001
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end0
PositionCDS
2D Structure