Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGAGACAGGAAAATTGCTTGAACCCAGGAGGCTGAGGTTGCAGTGAGCCAGG
..(((((((((((((((((...&.)))))))))).............))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033128
GeneSymbolSCIN
Binding site1971,2024
Score1.0
Seed1
Au0.397
Energy-26.7
Binding len32
Me-4.957
Phylopstem-0.06811807333333333
Phylopflank-0.06682809875
Longest consecutive pairings10
Position of longest consecutive pairings21
Pairings in 3prime end5
Position3UTR
2D Structure