Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTATGCAACTCTCCCGGACAGAGGGGCCGGG
..((((((((((((((((.(((&.)))))))))..)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033129
GeneSymbolSCRT2
Binding site2612,2644
Score0.846
Seed1
Au0.279
Energy-29.4
Binding len23
Me-4.957
Phylopstem0.6132346111111109
Phylopflank1.9380990775000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure