Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGGCCAGAAAGCAATCTTGTTTCTCCCCCTGCCAGTC
.((((((..((((((((.((..&)).))))))))...................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033136
GeneSymbolFGF1
Binding site483,520
Score0.846
Seed1
Au0.544
Energy-19.9
Binding len37
Me-7.163
Phylopstem-0.33323025
Phylopflank-0.11416385499999998
Longest consecutive pairings8
Position of longest consecutive pairings26
Pairings in 3prime end5
Position3UTR
2D Structure