Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCACACTGAGGGAGCCT
....(((((((((.(((((((.&))))).))..))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033139
GeneSymbolCALD1
Binding site3420,3440
Score0.923
Seed0
Au0.603
Energy-23.5
Binding len20
Me-10.403
Phylopstem0.8338675555555555
Phylopflank0.43029433875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure