Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCAGAGAGGAGGAAGA
..((..(((((((((((((...&)))))))))))))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033139
GeneSymbolCALD1
Binding site1239,1257
Score0.846
Seed0
Au0.515
Energy-22.8
Binding len18
Me-10.977
Phylopstem3.504262461538462
Phylopflank3.9240136974999995
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure