Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGAAACTCATGAAAAACCCAGACTGGAGACTGGA
..((((((((..(((((((...&.)))))))..)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033168
GeneSymbolB3GALNT1
Binding site1435,1470
Score1.0
Seed1
Au0.574
Energy-23.2
Binding len20
Me-11.129
Phylopstem0.4167928444444444
Phylopflank0.42665535875000016
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure