Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCGATTCAAAACGAACCGGTCTCAGAGAGGAGCAGGCTGTGA
(((..(((((((((((((....&.))))))))))))).....))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033176
GeneSymbolNKX2-4
Binding site1296,1340
Score1.0
Seed0
Au0.397
Energy-24.9
Binding len23
Me-11.089
Phylopstem2.305132230769231
Phylopflank2.1361333425
Longest consecutive pairings13
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure