Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTAAAATATGTTATGCCAGGC
.(((((((((..((((......&.))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033188
GeneSymbolKRTAP4-5
Binding site770,792
Score1.0
Seed1
Au0.632
Energy-17.6
Binding len17
Me-9.965
Phylopstem0.34508688888888894
Phylopflank0.51840631875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure