Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAGGGGACAGCCC
....(((((((((((((((...&)))))))))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033215
GeneSymbolPPP1R3F
Binding site1842,1861
Score0.923
Seed0
Au0.382
Energy-24.6
Binding len19
Me-9.547
Phylopstem1.5411296444444444
Phylopflank0.9816631399999999
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure