Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTCAATAAAAAGAGCTAAAGCACCCCCTAAGAGCATGTCCATGCCGGGTT
(((((((((...((((......&.))))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033223
GeneSymbolGABRG3
Binding site4494,4548
Score0.846
Seed1
Au0.471
Energy-17.5
Binding len19
Me-11.352
Phylopstem-0.14697732222222226
Phylopflank-0.20696269250000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure