Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGCAAGGATGGAAGCCAT
...(((((((((.((((((((.&)))))))).))))).....)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033225
GeneSymbolCSMD1
Binding site1470,1494
Score0.923
Seed0
Au0.5
Energy-25.5
Binding len24
Me-7.804
Phylopstem-0.5971629285714286
Phylopflank-0.4748191074999999
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure