Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGCAGAGGCTGCACTGAGCCAGG
..(((((((((((((((((...&)))))))))).............))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033251
GeneSymbolRPL13
Binding site1341,1372
Score0.885
Seed1
Au0.412
Energy-26.4
Binding len31
Me-4.957
Phylopstem-0.09490023333333335
Phylopflank-0.2328767249999999
Longest consecutive pairings10
Position of longest consecutive pairings21
Pairings in 3prime end5
Position3UTR
2D Structure