Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGTATGTGGGGTGCCAGGA
.((((((((...(((((.((..&)).)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033260
GeneSymbolFOXQ1
Binding site2502,2522
Score1.0
Seed1
Au0.603
Energy-18.3
Binding len20
Me-11.207
Phylopstem1.7319414999999998
Phylopflank1.1941667459999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure