Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGTCCAGTATGCCGGC
..(((((((((...........&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033278
GeneSymbolTRIM3
Binding site361,378
Score0.923
Seed1
Au0.353
Energy-15.0
Binding len11
Me-11.418
Phylopstem1.3623005555555554
Phylopflank1.5898715125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure