Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACATTGTTCTTCTACTGGCTGTGATGAAGTGCCAGA
..(((((((((((((((((...&)))))))))).....................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_033285
GeneSymbolTP53INP1
Binding site2886,2925
Score0.923
Seed1
Au0.618
Energy-19.0
Binding len39
Me-4.957
Phylopstem0.2981758389473685
Phylopflank0.32636954949999997
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end5
Position3UTR
2D Structure