Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGACCTGGGGGCTC
....(((((((.((((((((((&))))))))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033286
GeneSymbolKNSTRN
Binding site41,62
Score0.846
Seed0
Au0.382
Energy-27.4
Binding len21
Me-12.893
Phylopstem-0.15517088000000004
Phylopflank-0.4134100345967743
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end8
Position5UTR
2D Structure