Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGCGGCCGACTTAGCCGGTGG
((((((((((..(((((((...&))))))).)).......)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033286
GeneSymbolKNSTRN
Binding site226,252
Score0.846
Seed1
Au0.485
Energy-23.7
Binding len26
Me-10.109
Phylopstem-0.20162824705882362
Phylopflank0.4322830125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure