Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGTGTCATGGGTATGCCCAGAGCCCAGGAGTTCAGA
..((((((((((((((((((..&.)))))))))...)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033289
GeneSymbolMID1
Binding site4800,4839
Score0.808
Seed1
Au0.456
Energy-24.7
Binding len24
Me-4.957
Phylopstem5.535789318181819
Phylopflank5.243695638749999
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure