Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAAAAAGAAAAGGGGAGGGGCACCAATTCACCTACACTCCAGTGG
(((((((((((((((((((...&)))))..........)))))))))..................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033290
GeneSymbolMID1
Binding site5679,5727
Score0.846
Seed1
Au0.588
Energy-21.6
Binding len48
Me-3.938
Phylopstem5.3134503425531925
Phylopflank4.923543788750001
Longest consecutive pairings9
Position of longest consecutive pairings24
Pairings in 3prime end5
Position3UTR
2D Structure