Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACCTGGCAGGGACGCTGGG
..((((((((((.((((((((.&)))))))).))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033292
GeneSymbolCASP1
Binding site273,294
Score0.885
Seed1
Au0.529
Energy-21.9
Binding len21
Me-6.246
Phylopstem2.059876909090909
Phylopflank1.1771175029999998
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure