Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGGCTCAGAAGGGAATGTCAA
...((((((((((((((((.((&))..))))))))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033293
GeneSymbolCASP1
Binding site130,153
Score0.846
Seed0
Au0.5
Energy-21.2
Binding len23
Me-6.515
Phylopstem-0.1422934166666667
Phylopflank0.3342322075
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure