Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCCACTACAGCCCCAAGCTCCTAACTCAGACCCAGAATGGAGCCGGTT
.(((((((((.((((((((.((&.))..)))))))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033309
GeneSymbolB3GNT9
Binding site1529,1580
Score0.846
Seed1
Au0.471
Energy-31.8
Binding len24
Me-6.618
Phylopstem3.262331111111111
Phylopflank3.5634155875000006
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure