Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGCTATCCAGGCTGCAGTGGAGCCTGGTGA
((((((((((..(((((((((.&.))))))))).......)))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_033318
GeneSymbolSMDT1
Binding site729,764
Score0.846
Seed1
Au0.441
Energy-26.6
Binding len29
Me-10.109
Phylopstem-0.4198427909090908
Phylopflank-0.11743151075
Longest consecutive pairings9
Position of longest consecutive pairings19
Pairings in 3prime end7
Position3UTR
2D Structure