Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACAGTAGTCTGCACATTGGTTA&AATCAATGCATTTAATCTTTCCTGGATGGCTGCCATGTGGACTGCATGC
.((((((((((((...((((..&.)))))))))))))).)).
Details
MiRNAhsa-miR-199a-3p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site1482,1531
Score1.0
Seed1
Au0.559
Energy-17.7
Binding len19
Me-5.619
Phylopstem0.7042136307692307
Phylopflank3.063634146249999
Longest consecutive pairings14
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure