Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTTTGCACGGGTGGGCCTTGTCT&GGAAATGTCCCTCCCAGAGTGAAGTCGCAGGGCCCGCCCCGCGT
...(((..(((((((((((((..&.))))))))))))).))).
Details
MiRNAhsa-miR-557
RefseqIDNM_033319
GeneSymbolCENPL
Binding site678,722
Score0.846
Seed0
Au0.309
Energy-29.7
Binding len19
Me-10.372
Phylopstem-0.6234169076923077
Phylopflank0.28372389000000003
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end6
Position5UTR
2D Structure