Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGTCTAGGATTGTTGGAGGAG&CTCCTAGTGCATCCTCAAGACCT
.(((((((((.(((...(((((&)))))...)))))))..))))).
Details
MiRNAhsa-miR-601
RefseqIDNM_033319
GeneSymbolCENPL
Binding site875,898
Score0.923
Seed1
Au0.529
Energy-20.9
Binding len23
Me-7.587
Phylopstem0.5997412727272725
Phylopflank1.5298297800000002
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure