Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCTCATCCATAGTTGTCACTG&CAGGAGCGAGGGTCGCAGAGCTGGGTGAGCG
.(((((((((...((((.(((.&.))).))))...))))))))).
Details
MiRNAhsa-miR-549a-5p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site648,679
Score1.0
Seed1
Au0.368
Energy-20.9
Binding len22
Me-11.254
Phylopstem0.47778415555555553
Phylopflank0.05833240374999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure