Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGAGACTGATGAGTTCCCGGGA&CCCGCGTCTGAGGGAGCGGAGGTCTTCCTGGGGGATTTCAGTCTCCA
(((((((((....(((((((((&.)))))))))...))))))))).
Details
MiRNAhsa-miR-873-3p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site715,762
Score0.923
Seed1
Au0.485
Energy-31.4
Binding len23
Me-12.641
Phylopstem0.16005033333333338
Phylopflank0.15861661375000008
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position5UTR
2D Structure