Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTCCGGCTCGCGTGGGTGTGT&GCGCCAAGGAGGCTTCCTGCGTGGGGCCGCAGAGCGAGTCGGGAAA
((((((((((((.(((((.(..&.).))).))..)))))))))))).
Details
MiRNAhsa-miR-1180-3p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site444,490
Score0.846
Seed1
Au0.368
Energy-26.4
Binding len24
Me-5.227
Phylopstem-0.04956406666666668
Phylopflank-0.19684647625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure