Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGGTACGGCCCAGTGGGGGG&TCGCCGCTGGGGTCCAAGCGCCCTTCAACTCCGCCCGCTAGTGCCCAA
.((((((((.((((((((.((.&)).)))))))).)...........................))))))).
Details
MiRNAhsa-miR-1225-5p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site185,233
Score0.846
Seed1
Au0.426
Energy-27.5
Binding len48
Me-5.036
Phylopstem0.3142758375
Phylopflank0.622319455
Longest consecutive pairings8
Position of longest consecutive pairings37
Pairings in 3prime end6
Position5UTR
2D Structure