Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGCCCCTGTGCCGCCCCCAG&GGGAAACGATTTTAAACTGAAGAGGCGGCGGAGGGCCGAATTCCCTTTTCTCAACGGCTTG
.((((((((.((((((((((..&)))....................))))))).)))).....................)))).
Details
MiRNAhsa-miR-1225-3p
RefseqIDNM_033319
GeneSymbolCENPL
Binding site484,545
Score0.846
Seed1
Au0.412
Energy-26.5
Binding len61
Me-5.036
Phylopstem-0.19651549333333337
Phylopflank-0.17996704999999993
Longest consecutive pairings7
Position of longest consecutive pairings31
Pairings in 3prime end6
Position5UTR
2D Structure